Rapid alkalinization factors in poplar cell cultures. Peptide isolation, cDNA cloning, and differential expression in leaves and methyl jasmonate-treated cells.
Identifieur interne : 004394 ( Main/Exploration ); précédent : 004393; suivant : 004395Rapid alkalinization factors in poplar cell cultures. Peptide isolation, cDNA cloning, and differential expression in leaves and methyl jasmonate-treated cells.
Auteurs : Miyoshi Haruta [Canada] ; C Peter ConstabelSource :
- Plant physiology [ 0032-0889 ] ; 2003.
Descripteurs français
- KwdFr :
- ADN complémentaire (composition chimique), ADN complémentaire (génétique), ARN messager (effets des médicaments et des substances chimiques), ARN messager (génétique), ARN messager (métabolisme), Acétates (pharmacologie), Analyse de séquence d'ADN (MeSH), Cellules cultivées (MeSH), Clonage moléculaire (MeSH), Concentration en ions d'hydrogène (MeSH), Cyclopentanes (pharmacologie), Données de séquences moléculaires (MeSH), Feuilles de plante (effets des médicaments et des substances chimiques), Feuilles de plante (génétique), Feuilles de plante (métabolisme), Oxylipines (MeSH), Populus (cytologie), Populus (génétique), Populus (métabolisme), Protéines végétales (génétique), Protéines végétales (isolement et purification), Protéines végétales (métabolisme), Régulation de l'expression des gènes végétaux (effets des médicaments et des substances chimiques), Similitude de séquences d'acides aminés (MeSH), Séquence d'acides aminés (MeSH).
- MESH :
- composition chimique : ADN complémentaire.
- cytologie : Populus.
- effets des médicaments et des substances chimiques : ARN messager, Feuilles de plante, Régulation de l'expression des gènes végétaux.
- génétique : ADN complémentaire, ARN messager, Feuilles de plante, Populus, Protéines végétales.
- isolement et purification : Protéines végétales.
- métabolisme : ARN messager, Feuilles de plante, Populus, Protéines végétales.
- pharmacologie : Acétates, Cyclopentanes.
- Analyse de séquence d'ADN, Cellules cultivées, Clonage moléculaire, Concentration en ions d'hydrogène, Données de séquences moléculaires, Oxylipines, Similitude de séquences d'acides aminés, Séquence d'acides aminés.
English descriptors
- KwdEn :
- Acetates (pharmacology), Amino Acid Sequence (MeSH), Cells, Cultured (MeSH), Cloning, Molecular (MeSH), Cyclopentanes (pharmacology), DNA, Complementary (chemistry), DNA, Complementary (genetics), Gene Expression Regulation, Plant (drug effects), Hydrogen-Ion Concentration (MeSH), Molecular Sequence Data (MeSH), Oxylipins (MeSH), Plant Leaves (drug effects), Plant Leaves (genetics), Plant Leaves (metabolism), Plant Proteins (genetics), Plant Proteins (isolation & purification), Plant Proteins (metabolism), Populus (cytology), Populus (genetics), Populus (metabolism), RNA, Messenger (drug effects), RNA, Messenger (genetics), RNA, Messenger (metabolism), Sequence Analysis, DNA (MeSH), Sequence Homology, Amino Acid (MeSH).
- MESH :
- chemical , chemistry : DNA, Complementary.
- chemical , drug effects : RNA, Messenger.
- chemical , genetics : DNA, Complementary, Plant Proteins, RNA, Messenger.
- chemical , isolation & purification : Plant Proteins.
- chemical , metabolism : Plant Proteins, RNA, Messenger.
- chemical , pharmacology : Acetates, Cyclopentanes.
- cytology : Populus.
- drug effects : Gene Expression Regulation, Plant, Plant Leaves.
- genetics : Plant Leaves, Populus.
- metabolism : Plant Leaves, Populus.
- Amino Acid Sequence, Cells, Cultured, Cloning, Molecular, Hydrogen-Ion Concentration, Molecular Sequence Data, Oxylipins, Sequence Analysis, DNA, Sequence Homology, Amino Acid.
Abstract
A family of peptides inducing rapid pH alkalinization in hybrid poplar (Populus trichocarpa x Populus deltoides) cell culture medium was isolated from hybrid poplar leaves. Five related approximately 5-kD peptides were purified by high-performance liquid chromatography and analyzed by matrix-assisted laser desorption ionization-mass spectrometry. The N-terminal sequence of one of the isolated peptides was very similar to a previously characterized peptide from tobacco (Nicotiana tabacum), rapid alkalinization factor (RALF), which causes a rapid increase in culture medium pH when added to tobacco cell cultures (G. Pearce, D.S. Moura, J. Stratmann, C.A. Ryan [2001] Proc Natl Acad Sci USA 98: 12843-12847). Two unique poplar RALF cDNAs (PtdRALF1 and PtdRALF2) were isolated from a poplar cDNA library and used to study RALF expression in poplar saplings and cultured poplar cells. Both genes were found to be expressed constitutively in poplar saplings and cultured cells. However, PtdRALF2 was expressed in leaves at very low levels, and its expression in suspension culture cells was transiently suppressed by methyl jasmonate (MeJa). Although the function of these novel peptides remains enigmatic, our experiments suggest their role may be developmental rather than stress related. Overall, our study confirms the presence of active RALF peptides in other plants, and provides new data on the complexity of the RALF gene family in poplar.
DOI: 10.1104/pp.014597
PubMed: 12586905
PubMed Central: PMC166857
Affiliations:
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Five related approximately 5-kD peptides were purified by high-performance liquid chromatography and analyzed by matrix-assisted laser desorption ionization-mass spectrometry. The N-terminal sequence of one of the isolated peptides was very similar to a previously characterized peptide from tobacco (Nicotiana tabacum), rapid alkalinization factor (RALF), which causes a rapid increase in culture medium pH when added to tobacco cell cultures (G. Pearce, D.S. Moura, J. Stratmann, C.A. Ryan [2001] Proc Natl Acad Sci USA 98: 12843-12847). Two unique poplar RALF cDNAs (PtdRALF1 and PtdRALF2) were isolated from a poplar cDNA library and used to study RALF expression in poplar saplings and cultured poplar cells. Both genes were found to be expressed constitutively in poplar saplings and cultured cells. However, PtdRALF2 was expressed in leaves at very low levels, and its expression in suspension culture cells was transiently suppressed by methyl jasmonate (MeJa). Although the function of these novel peptides remains enigmatic, our experiments suggest their role may be developmental rather than stress related. Overall, our study confirms the presence of active RALF peptides in other plants, and provides new data on the complexity of the RALF gene family in poplar.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">12586905</PMID><DateCompleted><Year>2003</Year><Month>05</Month><Day>23</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0032-0889</ISSN><JournalIssue CitedMedium="Print"><Volume>131</Volume><Issue>2</Issue><PubDate><Year>2003</Year><Month>Feb</Month></PubDate></JournalIssue><Title>Plant physiology</Title><ISOAbbreviation>Plant Physiol</ISOAbbreviation></Journal><ArticleTitle>Rapid alkalinization factors in poplar cell cultures. Peptide isolation, cDNA cloning, and differential expression in leaves and methyl jasmonate-treated cells.</ArticleTitle><Pagination><MedlinePgn>814-23</MedlinePgn></Pagination><Abstract><AbstractText>A family of peptides inducing rapid pH alkalinization in hybrid poplar (Populus trichocarpa x Populus deltoides) cell culture medium was isolated from hybrid poplar leaves. Five related approximately 5-kD peptides were purified by high-performance liquid chromatography and analyzed by matrix-assisted laser desorption ionization-mass spectrometry. The N-terminal sequence of one of the isolated peptides was very similar to a previously characterized peptide from tobacco (Nicotiana tabacum), rapid alkalinization factor (RALF), which causes a rapid increase in culture medium pH when added to tobacco cell cultures (G. Pearce, D.S. Moura, J. Stratmann, C.A. Ryan [2001] Proc Natl Acad Sci USA 98: 12843-12847). Two unique poplar RALF cDNAs (PtdRALF1 and PtdRALF2) were isolated from a poplar cDNA library and used to study RALF expression in poplar saplings and cultured poplar cells. Both genes were found to be expressed constitutively in poplar saplings and cultured cells. However, PtdRALF2 was expressed in leaves at very low levels, and its expression in suspension culture cells was transiently suppressed by methyl jasmonate (MeJa). Although the function of these novel peptides remains enigmatic, our experiments suggest their role may be developmental rather than stress related. Overall, our study confirms the presence of active RALF peptides in other plants, and provides new data on the complexity of the RALF gene family in poplar.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Haruta</LastName><ForeName>Miyoshi</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Centre for Forest Biology and Department of Biology, University of Victoria, Victoria, British Columbia, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Constabel</LastName><ForeName>C Peter</ForeName><Initials>CP</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AY172330</AccessionNumber><AccessionNumber>AY172331</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, 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Complementary</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006863" MajorTopicYN="N">Hydrogen-Ion Concentration</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D054883" MajorTopicYN="N">Oxylipins</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" 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